BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A05SP1|AL429834
(740 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1561 1171 0.0
3x_Contig1136 147 3e-35
>3x_Contig1561
Length = 10959
Score = 1171 bits (590), Expect = 0.0
Identities = 604/606 (99%), Gaps = 2/606 (0%)
Strand = Plus / Plus
Query: 132 gaggagtaaatggatagcctgttcctgtgcgtgatgtgcacaatcctttttgaaattaca 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggagtaaatggatagcctgttcctgtgcgtgatgtgcacaatcctttttgaaattaca 60
Query: 192 atattcagacgtgatttttaaagattcaatagtttctttatactctgtaccattaattat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atattcagacgtgatttttaaagattcaatagtttctttatactctgtaccattaattat 120
Query: 252 gctcttcaactgcctatgaaccacatgatcagagtatcttctcaaaggagctgtgaaatg 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctcttcaactgcctatgaaccacatgatcagagtatcttctcaaaggagctgtgaaatg 180
Query: 312 tgtgaacaatggcaaattcaatgaataatgcgcaaattggtcaggttcgactttaccaga 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgaacaatggcaaattcaatgaataatgcgcaaattggtcaggttcgactttaccaga 240
Query: 372 tatgaaatatttagccggtgttaaggtcttggataaaaataactcaaccgccattcttgt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatgaaatatttagccggtgttaaggtcttggataaaaataactcaaccgccattcttgt 300
Query: 432 agtgttattatctatggcaagaattgaattcaaaactgattcagaacttgttatatccat 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgttattatctatggcaagaattgaattcaaaactgattcagaacttgttatatccat 360
Query: 492 ctcaacgccaagtttttcaactttcttttggaacgttttcaatttggtagaaattggttc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcaacgccaagtttttcaactttcttttggaacgttttcaatttggtagaaattggttc 420
Query: 552 tggttgtcttctcaagaaagcaacatctcccagggaagtgaacaatcgagtagcaacggt 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggttgtcttctcaagaaagcaacatctcccagggaagtgaacaatcgagtagcaacggt 480
Query: 612 attattcactttacgctctatttccgataaaagggtcaaagctttagaacgttgtaaaat 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attattcactttacgctctatttccgataaaagggtcaaagctttagaacgttgtaaaat 540
Query: 672 attcaaatcaactttaa-cttctcgtcatcgagagattccaaaagggggcaaagtcctgt 730
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 541 attcaaatcaactttaaccttctcgtcatcgagagattccaaaa-ggggcaaagtcctgt 599
Query: 731 ataaat 736
||||||
Sbjct: 600 ataaat 605
>3x_Contig1136
Length = 5035
Score = 147 bits (74), Expect = 3e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 tcaccgtgaactctcttttcaatacctaattcagggataaacacatcaaaagaagattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4962 tcaccgtgaactctcttttcaatacctaattcagggataaacacatcaaaagaagattca 5021
Query: 61 tatacttgcaaaac 74
||||||||||||||
Sbjct: 5022 tatacttgcaaaac 5035
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6583
Number of Sequences: 1807
Number of extensions: 6583
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 2
length of query: 740
length of database: 10,358,551
effective HSP length: 16
effective length of query: 724
effective length of database: 10,329,639
effective search space: 7478658636
effective search space used: 7478658636
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)